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Resources for EDC/FFA Combined Biotechnology Skills Standards "Combined Academic Knowledge Technical Skills, and Employability
Skills from Bioscience and Agricultural Biotechnology Skills Standards." By: Education Development Center, Inc. and FFA Foundation,
Inc. Web-site Annotation Compiled by
Bio-Link Staff TECHNICAL COMMUNICATION SKILLS 1)
Comprehend a technical
vocabulary a)
Biotechnology Terms Glossary a searchable dictionary sponsored by Monsanto b)
Biotech Life Science Dictionary a
searchable dictionary c)
A Genetics Glossary a
searchable dictionary (The University of Edinburgh School of Biology) 2)
Follow protocol a)
What is an SOP Explanatory
text and student exercises (requires free Bio-Link subscription) b)
How to
Understand and Interpret Food and Health-Related Scientific Studies (International Food Information Council) 3)
Maintain laboratory
notebook a)
Laboratory Notebooks A Bio-Link collection of detailed web sites
on the importance of recordkeeping. (requires free Bio-Link subscription) b)
Proper
Maintenance of a Laboratory Notebook Guidelines from
legal standpoint (Darby & Darby Intellectual Property law) c)
Guidelines
for Keeping a Laboratory Record Guidelines with examples (Rice University) d)
Control and Use of Laboratory
Notebooks (West Coast
Analytical Service) 4)
Interact with vendors,
colleague, and clients 5)
Write or update
protocols, SOP's, manuals, reports, and technical summaries a)
What is an SOP (requires free Bio-Link subscription) b)
Preparation of
Lab Reports Discussion of
the purpose of the 5 sections of a lab report (New Hampshire Biotechnology
Center) SAFETY
1)
Identify first aid
supplies, personnel, emergency protection areas and evacuation plan 2)
Follow appropriate
safety procedures, guidelines, and chemical hygiene plan a)
OSHA's Laboratory
Standard OSHA's Laboratory safety regulations b)
The Hazard
Communication (Right-to-Know) Standard 29 CFR 1910.1200 Textual
explanation (LabSafety.com) c)
CDC Chemical Safety Manual d)
University of Vermont (University of Vermont's Chemical Hygiene
Plan)
e)
UC Davis General Guidelines for Management of
Laboratory Chemicals 3)
Follow universal
precautions for biological pathogens a)
American Biological Safety Organization (ABSA) c)
MSDS for
Biological Organisms d)
CDC Biosafety in
Microbiological and Biomedical Laboratories
(BMBL) e)
Michigan State Biosafety
pages f)
OSHA Bloodborne
Pathogen Standard (OSHA's regulations) g)
Bloodborne Pathogens Training
Manual (University of Wisconsin) 4)
Follow use of laminar
flow, fume hoods and biological safety cabinets a)
CDC Primary Containment
for Biohazards: b)
Fume Hood maintenance (Cornel University) 5)
Use protective equipment
a)
Recommendations for Chemical
Protective Clothing (NIOSH chemical resistance information) b)
Michigan State
University Glove Guide Chemical
Resistance in Gloves c)
What to Look for
When Choosing Protective Eyewear (LabSafety.com) d)
Selecting Chemical
Protective Clothing for Vapor and Splash Protection (LabSafety.com) e)
Occupational
Safety - Hand Protection (Environmental
Safety) This site has a picture demonstration how to remove contaminated gloves 6)
Take appropriate
protective measures while working around UV light a)
Hazards of Ultraviolet
Radiation (UC Davis
SafetyNet) b)
What to Look for
When Choosing Protective Eyewear (LabSafety.com) 7)
Maintain safety
equipment. a)
Emergency Eyewashes
& Showers - Proper Testing and Maintenance (LabSafety.com) b)
Use, Placement,
Maintenance and Testing of Portable Fire Extinguishers (LabSafety.com) 8)
Monitor, use, store and
dispose of hazardous materials properly a)
IRIS EPA hazardous materials
database 9)
Observe rules of safety
with radioactive materials a)
CDC Radiation Safety Manual c)
UC Davis guidelines (UC
Davis SafetyNet) d)
Steps You Can Take to Limit
Your Exposure to Radiation (UC
Davis SafetyNet) 10) Attend required training a)
UC Davis Need and responsibility
for Training (UC Davis
SafetyNet) 11) Observe rules of electric safety a)
Workplace Electrical Safety Tips (National Electric Safety Foundation) b)
OSHA's Electrical safety
pages c) UC Davis' Electrical Safety Guidelines (UC Davis SafetyNet) d) Electrical Safety (National Institute of Occupational Safety and Health NIOSH) 12) Recognize safety symbols/signs a)
Labeling for
Hazardous Communication (LabSafety.com) b)
Identification and Segregation
of Chemical Waste (UC
Davis SafetyNet) 13) Maintain, understand, and follow materials safety data
sheets (MSDS) and worker protection Standards (WPS) a)
MSDS on-line Cornell University maintains numerous links
to MSDS sites b)
MSDS Search search by product
or manufacturer c)
NIOSH Chemical Carcinogen guide d)
Glossary of MSDS Terms (UC Davis SafetyNet) 14) Recognize common lab hazards and observe procedures
for the safe use of instruments and gas cylinders a)
Centrifuge
safety Cornell University
description of a centrifuge accident b)
Fume Hood Safety
(Cornell University) Guide,
selection and maintenance c)
Compressed Gas safety (UC Davis SafetyNet) d)
Gas Cylinder Storage
and Handling (LabSafety.com) e)
Gas safety rules (Advanced Chemical Safety) f)
Safe use of Refrigerators
and Freezers (UC Davis
SafetyNet) g)
Autoclave use (UC Davis SafetyNet) h)
Needle and Syringe Safety
(UC Davis SafetyNet) 15) Keep work area free from clutter a)
Industrial
Housekeeping - General Requirements (LabSafety.com) b)
Protecting Products Against
Contamination By Making Cleanliness a Daily Habit (GMP Institute) BASIC LAB SKILLS1)
Use scientific method a)
Experimental
Science Projects: An
Introductory Level Guide (Mankato
State University) b)
Experimental Science
Projects An Intermediate
Level Guide (Mankato State University) c)
Critical
Thinking, The Scientific Method - Teacher's guide (D.S.
Adams, Smith College, Northampton, MA) d)
John Snow (UCLA School of Epidemiology) Multimedia
presentation of History of Cholera outbreak in 1858 2)
Obtain and read
protocol, test procedure, standard operating procedures (SOPs) a)
What is an SOP? (requires free Bio-Link subscription) b)
Standard Operating Procedures
(West Coast Analytical Service)
Index of SOP’s used in testing c)
Solutions, Reagents and
Standards Preparation and Documentation (West Coast Analytical Service) 3)
Check equipment a)
Instrument Qualification (WCAS SOP) 4)
Sterilize equipment
where appropriate a)
Antimicrobial Pesticides (EPA) b)
Selecting Chemical
Disinfectants (UC Davis
SafetyNet) c)
Effective Use of
Autoclaves (UC Davis
SafetyNet) d)
Autoclave
Procedures (Michigan State
University) e)
Disinfectants and
Antiseptics (LabSafety.com) f)
Sterilization
of plasticware (Nalgene) 5)
Prepare glassware a)
Useful technical information on scientific glassware and products. (Bellco
Glass) b)
Use and Care of
plasticware (Nalgene) 6)
Organize compounds 7)
Laboratory
Chemical Safety (Flinn
Scientific) Series of Safety tips for Chemistry Lab 8)
Perform mathematical
calculations and conversions a)
Units and
Measures used in cell biology (Dr.
Heidcamp, Gustavus Adolphus College) b)
Measurements
(General Chemistry Online) 9)
Operate centrifuges a)
Technical Tutorials Centrifugation (S. Wallman, New Hampshire Community
Technical College) b)
Centrifugation (Dr.
Heidcamp, Gustavus Adolphus College) 10) Use titration and pipetting techniques a)
Pipetting Matters (Artel technical information) b)
ChemLab (Dartmouth College) c)
Instruction manuals (Rainin Pipetting Solutions) d)
Quantitative
Pipetting and Spectrophotometry (University of Havwaii, Microbiology Department) laboratory exercise 11) Prepare and dispense stock reagents, buffers, media
and solutions a)
Concentration
Measurements and Solution Preparation (S. Wallman, New Hampshire Community Technical College) b)
General Instructions For
Solution Prepartion (S.
Wallman, New Hampshire Community Technical College) c)
Solutions, Reagents, and Standards
Preparation and Documentation (WCAS
SOP) d)
Molarity,
molality, or normality? (Carolina Biological Supply Company) A quick review e)
Solution
Preparations (Carolina Biological Supply Company) f)
Preparation
of some chemical solutions (Dr.,
Gustavus Adolphus College) 12) Maintain reagent integrity (store properly, avoid
cross-contamination, use at proper temperature, etc.) 13) Sterilize reagents, buffers, media and solutions where
appropriate a)
Preparing
and Dispensing Media (University
of Hawaii, Department of Microbiology) 14) Calculate and prepare dilution's series a)
Serial Dilution of
Sperm (Stanford University) Lab
exercise 15) Monitor physical properties of reagents, buffers,
media and solution a)
Understanding
Conductivity (LabSafety.com) b)
Technical Conductivity and
Resistivity (Omega.com) c)
Introduction to pH (Omega.com) d)
Turbidity measurement (Omega.com) 16) Determine acceptability and optimum conditions of
reagents for tests 17) Request tests and match request to test sample 18) Set up and work reactions 19) Prepare test subject (mentally and physically) for
sampling a)
Interpretive
Guidelines: Laboratories (The
Virtual Hospital) Guidelines for human testing 20) Assess acceptability/appropriateness of specimen 21) Obtain and label sample/specimen 22) Prepare sample for testing 23) Perform tests/assays: chemical, biological, clinical,
environmental robotic, mechanical 24) Perform histotechniques where needed a)
Histological
Stains (Dental Histology) b)
Histochemical and Cytochemical
Knowledge Base (The Histochemical Society) 25) Perform basic separation techniques a)
Chemical Separations (Supelco)
b)
Centrifugation (Dr. Heidcamp, Gustavus Adolphus
College) c)
Cell
Biology Laboratory Manual (Dr.
Heidcamp, Gustavus Adolphus College) see
"cell fractionation" 26) Operate chromatography equipment a)
High Performance
Liquid Chromatography (HPLC): A Users Guide (University of Kentucky Analytical Spectroscopy Group) 27) Return, archive, or dispose of samples appropriately 28) Package, handle and ship biological materials 29) Maintain inventory of laboratory supplies 30) Order supplies and reagents 31) Date, label, store supplies and/or reagents a)
The
Do's and Don'ts of Chemical Labeling (Flinn Scientific, Inc.) 32) Maintain and store manufactured products inventory MANUFACTURING AND PRODUCTION New
Hampshire Community College Biotechnology Manufacturing course Introduction
to Biochemical Engineering Bioengineering
course RPI Biotech Chronicles Access
Excellence Biotechnology links 1)
Follow Standard
Operating Procedures (SOP) and batch record a)
What is an SOP? (requires free Bio-Link subscription) b)
Index of Standard Operating
Procedures (WCASlab) SOP examples
posted on-line c)
Standard
Operating Procedure (SOP) Writer's Guide (Los Alamos National
Laboratory) d)
Batch records (requires free Bio-Link subscription) classroom activity e)
SOP Writing Workshop (Proceedings of the
4th National Symposium on Biosafety) 2)
Obtain raw materials a)
Company
Addresses List of links to suppliers 3)
Set up equipment
according to process requirements 4)
Perform cleaning
(manual/Clean in Place (CIP)) and sterilize (autoclave/Sterilize in Place
(SIP)) 5)
Prepare buffers and
solutions a)
General Instructions For
Solution Preparation (S.
Wallman, New Hampshire Community Technical College) 6)
Start up production 7)
Monitor production lines a)
Using Absorption Spectra For
Quality Control In A Pharmaceutical Company (requires free Bio-Link subscription) Laboratory
activity b)
pH Control: A Magical Mystery
Tour (Omega.com) discussion
of contol of pH systems 8)
Operate reactors and
recover products a)
Biotechnology Manufacturing
- (S. Wallman, New Hampshire
Community Technical College) Fermentation course 9)
Obtain, process, and
store product samples (applies to all manufacturing steps) a)
Fermentation
in the Food Industry (University of Wisconsin-River Falls) A
series of lectures and labs. b)
Biotechnology
Classroom Activities (University
of Wisconsin-River Falls) A number of classroom activities related to
Biotechnology c)
Corn Wet Milling Lab (requires free Bio-Link subscription) Laboratory
activity 10) Purify product a)
Starch Hydrolysis (requires
free Bio-Link subscription) Laboratory
activity 11) Formulate, fill, and inspect product 12) Label and package product a)
Labeling for
Hazardous Communication (LabSafety.com) 13) Distribute final product REGULATORY COMPLIANCE 1)
Follow regulations: U.S.
Food and Drug Administration (FDA) a)
FDA (US
Food and Drug Administration) Links to all regulations b)
Creative Ideas for Teaching GMP (requires
free Bio-Link subscription) c)
GMP Institute (GMP Institute) Includes many useful links
that are well organized 2)
Follow regulations: U.S.
Occupational Safety and Health Administration (OSHA) a)
OSHA (U.S. Occupational Safety and Health
Administration) Links to regulations 3)
Follow regulations: U.S.
Department of Agriculture (USDA) a)
USDA (U.S. Department of Agriculture) 4)
Follow regulations:
National Institutes of Health (NIH) a)
NIH Guidelines Office of Biotechnology Activities, includes Recombinant
DNA Guidelines, most recent updates b)
NIH Safety management and
Compliance (Division
of Safety) 5)
Follow regulations:
National Research Council (NRC) 6)
Follow regulations:
Department of Transportation (DOT) a)
DOT (Department
of Transportation) 7)
Follow regulations: U
.S. Environmental Protection Agency (EPA) a)
EPA (U
.S. Environmental Protection Agency) b)
EPA Integrated Risk
Information System Iris (EPA
information on hazardous chemicals) 8)
Follow state and local
regulations a)
How To Access The Code Of Federal
Regulations (requires free Bio-Link subscription) access information b)
Understanding the
Code of Federal Regulations (CFR) (LabSafety.com) 9)
Follow industry and
professional regulations a)
The Magical
Demystifying Tour of ISO 9000 and ISO 14000 (International Organization for Standardization) 10) Perform manufacturing using current Good Manufacturing
Practices (cGMP) a)
Creative Ideas for Teaching GMP (requires
free Bio-Link subscription) Curriculum and laboratory activities 11) Follow regulations: Centers for Disease Control and
Prevention (CDC) a)
Biosafety Documents (CDC Ohasis) 12) Follow regulations: Nuclear Regulatory Commission
(NRC) 13) Follow regulations: Clinical Laboratory Improvement
(CLIA, 88, Amendment of 1988 Protein techs skills) a)
Pharmaceutical Development,
Clinical Trials, Legal Services and Regulatory Affairs (Biotechnology Virtual Library) b)
The Clinical Laboratory
Improvement Act (CLIA) (Virtual Hospital) Computer assisted course SPECIFIC LAB SKILLS 1)
Microbiology Skills a)
Maintain workshop and
equipment hygiene b)
Prepare, sterilize, and
dispense media, buffers, solutions, etc. c)
Identify and quantify
microorganisms and cells i)
Bacterial
Examination of Food (University
of Hawaii, Microbiology Department) Includes Laboratory Exercise d)
Isolate, maintain and
store pure cultures i)
Plasmid/Cosmid
Propagation and DNA Preparation Methods
(Washington University St. Louis) bacterial protocol ii)
Maintenance
of Probes in bacteria including Escherichia coli Storage of
bacterial stocks iii)
Aseptic Technique – (Protocols
Online) iv)
Streaking
for Isolation (University of
Hawaii, Microbiology Department) Includes videos and Lab Exercises e)
Maintain and analyze
fermentation materials i)
Transformation
of E. coli, Production and Assay of Beta-Galactosidase by an Aerobic
Fermentation. (University of
Wisconsin-River Falls) Lab Activity f)
Harvest cells g)
Transform hosts i)
DNA
Transformation Of Bacteria-Ampicillin (Office of Biotechnology, Iowa State University) Laboratory Activity h)
Perform bioassays i)
Inhibition
of Microbial Growth (University
of Hawaii, Microbiology Department) Lab Exercises i)
Decontaminate and
dispose of equipment, glassware and biologicals 2)
Cell Biology
Techniques a)
Isolate and characterize
cell lines i)
Establishment
of a Primary Culture (Dr. Heidcamp, Gustavus Adolphus
College) (Chick) Protocol ii)
Use of a
Hemacytometer (Dept of Animal Sciences, University of Florida) Protocol
iii)
Hemocytometer
reference guide (BD BioScience ) Technical use information iv)
Cell
Biology Laboratory Manual –(Dr.
Heidcamp, Gustavus Adolphus College) see chapter 12 v)
Human Cell
Culture Methods (Washington University St. Louis) b)
Propagate plant and
animal tissue i)
Fralin Biotechnology
Center's Plant Tissue Culture Kit (The Fralin Center, Virginia Tech) detailed laboratory exercise and
teachers notes ii)
CLONING
PLANTS BY TISSUE CULTURE (Michael
H. Renfroe James Madison University) iii)
Plant Tissue
Culture (Access Excellence) Full protocol c)
Use cryogenic techniques
i)
Cryopreservation
Application Guide (Nalgene) d)
Use microscopes i)
Light
Microscopy (Biosciences,
Rice University) ii)
Introduction to Optical
Microscopy (Molecular
Expressions) Lots of information and Virtual Microscope iii)
WWW Virtual Library:
Microscopy (WWW Virtual
Library) iv)
An Introduction to
Microscopy (Microscopy
UK ) includes the history of the
microscope v)
Microscopy
lectures (University of
Hawii, Microbiology Department) e)
Perform cytological
tests, i.e. sectioning and staining f)
Perform bioassays i)
Home Diagnostic Kits
(University of Kentucky) This
site lists and explains theory behind some kits. ii)
Fluorescence Detection (Clare Chemical Co) Source of many florescent
detection dyes 3)
Nucleic Acid
Techniques Recombinant DNA
Chapter (MIT Biotechnology
Hypertextbook) DNA (The
Fralin Center, Virginia Tech) a)
Detect specific nucleic
acid sequences i)
DNA
Fingerprinting (Office
of Biotechnology, Iowa State University)
Laboratory Activity b)
Isolate nucleic acids i)
Isolation and
Spooling of DNA (S. Wallman,
New Hampshire Community Technical College) Laboratory Exercise ii)
DNA
Extraction From Bacteria (Office
of Biotechnology, Iowa State University)
Laboratory Activity iii)
Series of
DNA extraction procedures (Protocols
Online) iv)
CHO mRNA
Extraction Using Dynal's Super-Paramagnetic Beads (S. Wallman, New Hampshire Community Technical College) Laboratory
Exercise c)
Perform restriction
digests i)
Genome Mapping
Using Restriction Enzymes (S.
Wallman, New Hampshire Community Technical College) Laboratory Exercise ii)
DNA
Enzymatic Manipulation (Protocols Online) iii)
Plasmid
Isolation And Analysis (Office
of Biotechnology, Iowa State University) Laboratory Activity d)
Perform gel
electrophoresis i)
Use Of
Restriction Enzymes In DNA Fingerprinting (S. Wallman, New Hampshire Community Technical College) Laboratory Exercise ii)
Technical Tutorials Calibration of Agarose
Gels (S. Wallman, New
Hampshire Community Technical College) Laboratory Exercise iii)
DNA
Electrophoresis (Protocols
Online) e)
Label nucleic acids i)
Full DNA
Fingerprint (S. Wallman, New
Hampshire Community Technical College) Laboratory Exercise ii)
DNA Labeling (Protocols Online) f)
Perform nucleic acid
sequencing procedures i)
Sequence the
poly linker of pBR322 (S.
Wallman, New Hampshire Community Technical College) Laboratory Exercise ii)
DNA Sequencing
(Protocols Online) g)
Perform PCR procedures i)
PCR In DNA
Fingerprinting (S. Wallman,
New Hampshire Community Technical College) Laboratory Exercise ii)
Detection of
Alu by PCR (Access Excellence) h)
Use sequence database i)
Online Courses in Bioinformatics
A collection of resources (requires
free Bio-Link subscription) ii)
Blast for Beginners (requires
free Bio-Link subscription) i)
Perform basic cloning
techniques i)
Reverse
transcription of mRNA into cDNA (S. Wallman, New Hampshire Community Technical College) Laboratory
Exercise ii)
DNA Cloning
(Protocols Online) 4)
Protein Techniques Proteins (The
Fralin Center, Virginia Tech) basic descriptions a)
Detect specific proteins
i)
The Antibody Resource page (The Antibody Resource Page) b)
Precipitate/solubilize
proteins c)
Separate proteins,
isolate or characterize proteins i)
Hydrophobic
Interaction Chromatography Coupled With SDS-PAGE Electrophoresis (S.
Wallman, New Hampshire Community Technical College) Laboratory Exercise ii)
Introduction
to SDS-PAGE (Rice University) iii) Column Chromatography (S. Wallman, New Hampshire Community Technical College) Technical Tutorials iv) Polyacrylamide Gel Electrophoresis (PAGE) (S. Wallman, New Hampshire Community Technical College) Technical Tutorials v)
Using Interactive
Computer Technology to teach Protein Purification (requires free Bio-Link subscription) vi)
Cell
Biology Laboratory Manual (Dr. Heidcamp, Gustavus Adolphus College) d)
Concentrate proteins e)
Perform protein assays i)
Protein
Assays Rice University ii)
PAGE/Western For
Protein Identification (S.
Wallman, New Hampshire Community Technical College) laboratory Exercise iii)
Enzyme biochemistry
(MIT Biology Hypertextbook) QUALITY ASSURANCE/CONTROL 1)
Document product
specifications 2)
Inspect and verify
integrity of the product, procedure, specimen 3)
Use test standards,
controls 4)
Maintain QA logs 5)
Document customer complaints
6)
Take and document
corrective action according to SOP or as directed EQUIPMENT AND FACILITY1)
Check calibration and
perform systems diagnostics 2)
Monitor/record the
environmental conditions of the facility (growth chamber, greenhouse, seed
storage room, animal room or manufacturing suite) 3)
Validate or confirm
processes, equipment, facilities, kits and vendor products 4)
Perform or schedule
preventive maintenance 5)
Clean work area
according to SOPs 6)
Sample environment 7)
Implement systems
updates 8)
Maintain equipment logs 9)
Trouble shoot and repair
equipment (work order) 10) Label equipment and facilities 11) Ensure clean room integrity a)
Cleanroom
procedures (Cornell
University Nanofabrication facility) b)
MicrocompleteNews (Microcomplete)
A cleanroom cleaning company publishes technical info CARE FOR RESEARCH ANIMALS AND PLANTS Animal Care manuals and publications APHIS 1)
Monitor health and
maintain health records a)
Veterinary Government & Law
Resources (NetVet) 2)
Feed, water and
observe plants and animals and monitor intake a)
Guide to the Care
and Use of Research Animals (National Academy Press Online manual) b)
Working Safely with
Research Animals (CDC - Proceedings
of the 4th National Symposium on Biosafety) 3)
Receive and transport
animals 4)
Monitor housing
conditions 5)
Restrain and handle
animals 6)
Clean housing and
sterilize cages 7)
Maintain health records 8)
Monitor and maintain
animal safety 9)
Prepare food/feed and
prescription diets 10) Collect and process specimens 11) Maintain separate in-process, quarantine, and release
areas CONDUCT PLANT AND ANIMAL FIELD OR PRE-CLINICAL TRIALS 1)
Perform small-scale
field tests according to protocol a)
Bt
Corn Vs The European Corn Borer (ECB) Activity Laboratory Activity 2)
Apply plant pesticides
for evaluation 3)
Inoculate plants and/or
soil with biological and biochemical materials 4)
Manage plants/animals
for optimal growth a)
AgBios (Commercial site with some teaching modules) 5)
Collect biological data 6)
Use field database 7)
Perform bioassays GREENHOUSE/GROWTH CHAMBER 1)
Maintain plants for
optimal growth 2)
Gather pollen and handle
pollinate 3)
Apply agrichemicals
safely 4)
Maintain and monitor
insect populations 5)
Apply plant pests safely
6)
Mix growth media 7)
Pot and repot plants 8)
Monitor growth and
development of plants a)
A Practical Guide to
Containment (Information Systems for Biotechnology) Guide for
growing GMO’s in greenhouses 9)
Operate computerized
equipment 10) Perform bioassays TOP
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